Method Detail

• append

  <T extends java.lang.Appendable> T append​(T appendable,
                                            Fastq... fastq)
                                     throws java.io.IOException

  Append the specified FASTQ formatted sequences to the specified appendable.

  Type Parameters:

  T - extends Appendable

  Parameters:

  appendable - appendable to append the specified FASTQ formatted sequences to, must not be null

  fastq - variable number of FASTQ formatted sequences to append, must not be null

  Returns:

  the specified appendable with the specified FASTQ formatted sequences appended

  Throws:

  java.io.IOException - if an I/O error occurs

• append

  <T extends java.lang.Appendable> T append​(T appendable,
                                            java.lang.Iterable<Fastq> fastq)
                                     throws java.io.IOException

  Append the specified FASTQ formatted sequences to the specified appendable.

  Type Parameters:

  T - extends Appendable

  Parameters:

  appendable - appendable to append the specified FASTQ formatted sequences to, must not be null

  fastq - zero or more FASTQ formatted sequences to append, must not be null

  Returns:

  the specified appendable with the specified FASTQ formatted sequences appended

  Throws:

  java.io.IOException - if an I/O error occurs

• write

  void write​(java.io.File file,
             Fastq... fastq)
      throws java.io.IOException

  Write the specified FASTQ formatted sequences to the specified file.

  Parameters:

  file - file to write to, must not be null

  fastq - variable number of FASTQ formatted sequences to write, must not be null

  Throws:

  java.io.IOException - if an I/O error occurs

• write

  void write​(java.io.File file,
             java.lang.Iterable<Fastq> fastq)
      throws java.io.IOException

  Write the specified FASTQ formatted sequences to the specified file.

  Parameters:

  file - file to write to, must not be null

  fastq - zero or more FASTQ formatted sequences to write, must not be null

  Throws:

  java.io.IOException - if an I/O error occurs

• write

  void write​(java.io.OutputStream outputStream,
             Fastq... fastq)
      throws java.io.IOException

  Write the specified FASTQ formatted sequences to the specified output stream.

  Parameters:

  outputStream - output stream to write to, must not be null

  fastq - variable number of FASTQ formatted sequences to write, must not be null

  Throws:

  java.io.IOException - if an I/O error occurs

• write

  void write​(java.io.OutputStream outputStream,
             java.lang.Iterable<Fastq> fastq)
      throws java.io.IOException

  Write the specified FASTQ formatted sequences to the specified output stream.

  Parameters:

  outputStream - output stream to write to, must not be null

  fastq - zero or more FASTQ formatted sequences to write, must not be null

  Throws:

  java.io.IOException - if an I/O error occurs