java.lang.Runnable, AlignmentCalculationRunnablepublic class AlignmentCalcDB extends java.lang.Object implements AlignmentCalculationRunnable
| Modifier and Type | Field | Description |
|---|---|---|
static java.lang.String |
SCOP_VERSION |
| Constructor | Description |
|---|---|
AlignmentCalcDB(AlignmentGui parent,
Structure s1,
java.lang.String name1,
UserConfiguration config,
java.lang.String outFile,
java.lang.Boolean domainSplit) |
| Modifier and Type | Method | Description |
|---|---|---|
void |
cleanup() |
|
StructureAlignment |
getAlgorithm() |
|
void |
interrupt() |
stops what is currently happening and does not continue
|
boolean |
isInterrupted() |
|
void |
run() |
|
void |
setAlgorithm(StructureAlignment algo) |
|
void |
setNrCPUs(int useNrCPUs) |
public AlignmentCalcDB(AlignmentGui parent, Structure s1, java.lang.String name1, UserConfiguration config, java.lang.String outFile, java.lang.Boolean domainSplit)
public StructureAlignment getAlgorithm()
public void setAlgorithm(StructureAlignment algo)
public void run()
run in interface java.lang.Runnablepublic void interrupt()
interrupt in interface AlignmentCalculationRunnablepublic void cleanup()
cleanup in interface AlignmentCalculationRunnablepublic void setNrCPUs(int useNrCPUs)
setNrCPUs in interface AlignmentCalculationRunnablepublic boolean isInterrupted()