AFPChainScorer

java.lang.Object
- org.biojava.nbio.structure.align.util.AFPChainScorer

public class AFPChainScorer
extends java.lang.Object

- Constructor Summary
  
  Constructors
  Constructor Description
  
  AFPChainScorer()
- Method Summary
  
  All Methods Static Methods Concrete Methods
  Modifier and Type Method Description
  
  static double getTMScore(AFPChain align, Atom[] ca1, Atom[] ca2)
  - Methods inherited from class java.lang.Object
    clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Constructors
Constructor	Description
`AFPChainScorer()`

All Methods Static Methods Concrete Methods
Modifier and Type	Method	Description
`static double`	`getTMScore(AFPChain align, Atom[] ca1, Atom[] ca2)`

Constructor Detail
- AFPChainScorer
```
public AFPChainScorer()
```

Method Detail

getTMScore

public static double getTMScore(AFPChain align,
                                Atom[] ca1,
                                Atom[] ca2)
                         throws StructureException

Throws:: StructureException

Class AFPChainScorer

Constructor Summary

Method Summary

Methods inherited from class java.lang.Object

Constructor Detail

AFPChainScorer

Method Detail

getTMScore