LocalScopDatabase, ScopDatabasepublic class BerkeleyScopInstallation extends ScopInstallation
This provides updates to the MRC SCOP hierarchical classification.
| Modifier and Type | Field | Description |
|---|---|---|
static java.util.Map<java.lang.String,java.lang.String[]> |
EQUIVALENT_VERSIONS |
A map from SCOP version names which the Berkeley server offers as a
download to an array of equivalent deprecated SCOP version names.
|
claFileName, comFileName, DEFAULT_VERSION, desFileName, FILESPLIT, hieFileName, NEWLINE, SCOP_DOWNLOAD, SCOP_DOWNLOAD_ALTERNATE, scopVersion| Constructor | Description |
|---|---|
BerkeleyScopInstallation() |
clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, waitaddMirror, downloadClaFile, downloadComFile, downloadDesFile, downloadFileFromRemote, downloadHieFile, ensureClaInstalled, ensureComInstalled, ensureDesInstalled, ensureHieInstalled, filterByClassificationId, filterByDescription, filterByDomainName, getByCategory, getCacheLocation, getClaFilename, getComFilename, getComments, getDesFilename, getDomainByScopID, getDomainsForPDB, getHieFilename, getMirrors, getScopDescriptionBySunid, getScopDomainsBySunid, getScopDownloadURL, getScopNode, getScopVersion, getTree, nullifyComments, setCacheLocation, setScopDownloadURL, setScopVersion