pappso::GrpGroupingMonitor Class Reference

#include <grpgroupingmonitor.h>

Inheritance diagram for pappso::GrpGroupingMonitor:

Public Member Functions
	GrpGroupingMonitor ()
virtual	~GrpGroupingMonitor ()
virtual void	startGrouping (std::size_t total_number_protein, std::size_t total_number_peptide)
virtual void	groupingProtein ()
virtual void	startRemovingNonInformativeSubGroupsInAllGroups (std::size_t total_number_group)
virtual void	stopRemovingNonInformativeSubGroupsInAllGroups (std::size_t total_number_group)
virtual void	removingNonInformativeSubGroupsInGroup ()
virtual void	startNumberingAllGroups (std::size_t total_number_group)
virtual void	stopGrouping ()
Public Member Functions inherited from pappso::GrpGroupingMonitorInterface
virtual	~GrpGroupingMonitorInterface ()

Private Attributes
QTextStream *	mp_outStream
std::size_t	m_totalNumberProtein
std::size_t	m_totalNumberPeptide
std::size_t	m_currentProtein

Detailed Description

Definition at line 67 of file grpgroupingmonitor.h.

Constructor & Destructor Documentation

GrpGroupingMonitor()

pappso::GrpGroupingMonitor::GrpGroupingMonitor

(

)

Definition at line 56 of file grpgroupingmonitor.cpp.

~GrpGroupingMonitor()

pappso::GrpGroupingMonitor::~GrpGroupingMonitor ( )

virtual

Definition at line 61 of file grpgroupingmonitor.cpp.

{
  m_currentProtein++;
  (*mp_outStream) << "grouping protein " << m_currentProtein << " on "
                  << m_totalNumberProtein << "\n";
  mp_outStream->flush();

References m_currentProtein, m_totalNumberProtein, and mp_outStream.

Member Function Documentation

groupingProtein()

void pappso::GrpGroupingMonitor::groupingProtein ( )

virtual

Implements pappso::GrpGroupingMonitorInterface.

Definition at line 80 of file grpgroupingmonitor.cpp.

{

removingNonInformativeSubGroupsInGroup()

void pappso::GrpGroupingMonitor::removingNonInformativeSubGroupsInGroup ( )

virtual

Implements pappso::GrpGroupingMonitorInterface.

Definition at line 104 of file grpgroupingmonitor.cpp.

startGrouping()

void pappso::GrpGroupingMonitor::startGrouping ( std::size_t  total_number_protein, std::size_t  total_number_peptide  )

virtual

Implements pappso::GrpGroupingMonitorInterface.

Definition at line 69 of file grpgroupingmonitor.cpp.

{
  (*mp_outStream) << "removing non informative subgroups in all groups ("
                  << total_number_group << ")\n";
  mp_outStream->flush();
}
void
GrpGroupingMonitor::stopRemovingNonInformativeSubGroupsInAllGroups(
  std::size_t total_number_group)

References mp_outStream.

startNumberingAllGroups()

void pappso::GrpGroupingMonitor::startNumberingAllGroups ( std::size_t  total_number_group )

virtual

Implements pappso::GrpGroupingMonitorInterface.

Definition at line 110 of file grpgroupingmonitor.cpp.

startRemovingNonInformativeSubGroupsInAllGroups()

void pappso::GrpGroupingMonitor::startRemovingNonInformativeSubGroupsInAllGroups ( std::size_t  total_number_group )

virtual

Implements pappso::GrpGroupingMonitorInterface.

Definition at line 88 of file grpgroupingmonitor.cpp.

{
  (*mp_outStream) << "numbering " << total_number_group << " groups\n";
  mp_outStream->flush();

stopGrouping()

void pappso::GrpGroupingMonitor::stopGrouping ( )

virtual

Implements pappso::GrpGroupingMonitorInterface.

Definition at line 116 of file grpgroupingmonitor.cpp.

stopRemovingNonInformativeSubGroupsInAllGroups()

void pappso::GrpGroupingMonitor::stopRemovingNonInformativeSubGroupsInAllGroups ( std::size_t  total_number_group )

virtual

Implements pappso::GrpGroupingMonitorInterface.

Definition at line 96 of file grpgroupingmonitor.cpp.

{
  (*mp_outStream) << "grouping finished\n";
  mp_outStream->flush();
}
 

References mp_outStream.

Member Data Documentation

m_currentProtein

std::size_t pappso::GrpGroupingMonitor::m_currentProtein

private

Definition at line 73 of file grpgroupingmonitor.h.

Referenced by ~GrpGroupingMonitor(), and pappso::GrpGroupingMonitorInterface::~GrpGroupingMonitorInterface().

m_totalNumberPeptide

std::size_t pappso::GrpGroupingMonitor::m_totalNumberPeptide

private

Definition at line 72 of file grpgroupingmonitor.h.

Referenced by pappso::GrpGroupingMonitorInterface::~GrpGroupingMonitorInterface().

m_totalNumberProtein

std::size_t pappso::GrpGroupingMonitor::m_totalNumberProtein

private

Definition at line 71 of file grpgroupingmonitor.h.

Referenced by ~GrpGroupingMonitor(), and pappso::GrpGroupingMonitorInterface::~GrpGroupingMonitorInterface().

mp_outStream

QTextStream* pappso::GrpGroupingMonitor::mp_outStream

private

Definition at line 70 of file grpgroupingmonitor.h.

Referenced by startGrouping(), stopRemovingNonInformativeSubGroupsInAllGroups(), and ~GrpGroupingMonitor().

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The documentation for this class was generated from the following files:

• pappsomspp/grouping/grpgroupingmonitor.h
• pappsomspp/grouping/grpgroupingmonitor.cpp