vg::MinimizerMapper::Minimizer Struct Reference

#include <minimizer_mapper.hpp>

Public Member Functions
bool	operator< (const Minimizer &another) const

Public Attributes
gbwtgraph::DefaultMinimizerIndex::minimizer_type	value
size_t	agglomeration_start
size_t	agglomeration_length
size_t	hits
const gbwtgraph::hit_type *	occs
size_t	origin
double	score

Detailed Description

We define our own type for minimizers, to use during mapping and to pass around between our internal functions.

Member Function Documentation

operator<()

bool vg::MinimizerMapper::Minimizer::operator< ( const Minimizer &  another ) const

inline

Member Data Documentation

agglomeration_length

size_t vg::MinimizerMapper::Minimizer::agglomeration_length

agglomeration_start

size_t vg::MinimizerMapper::Minimizer::agglomeration_start

hits

size_t vg::MinimizerMapper::Minimizer::hits

occs

const gbwtgraph::hit_type* vg::MinimizerMapper::Minimizer::occs

origin

size_t vg::MinimizerMapper::Minimizer::origin

score

double vg::MinimizerMapper::Minimizer::score

value

gbwtgraph::DefaultMinimizerIndex::minimizer_type vg::MinimizerMapper::Minimizer::value

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The documentation for this struct was generated from the following file:

• src/minimizer_mapper.hpp