| addElement(int atomCount, int noIsotopes, const double *isotopeMasses, const double *isotopeProbabilities) | IsoSpec::Iso | |
| advanceToNextConfiguration() override final | IsoSpec::IsoLayeredGenerator | inlinevirtual |
| advanceToNextConfigurationWithinLayer() override final (defined in IsoSpec::IsoLayeredGenerator) | IsoSpec::IsoLayeredGenerator | inlinevirtual |
| allDim | IsoSpec::Iso | protected |
| atomCounts | IsoSpec::Iso | protected |
| confSize | IsoSpec::Iso | protected |
| dimNumber | IsoSpec::Iso | protected |
| get_conf_signature(int *space) const override final | IsoSpec::IsoLayeredGenerator | inlinevirtual |
| get_currentLThreshold() const (defined in IsoSpec::IsoLayeredGenerator) | IsoSpec::IsoLayeredGenerator | inline |
| getAllDim() const | IsoSpec::Iso | inline |
| getDimNumber() const | IsoSpec::Iso | inline |
| getHeaviestPeakMass() const | IsoSpec::Iso | |
| getLightestPeakMass() const | IsoSpec::Iso | |
| getModeLProb() const | IsoSpec::Iso | inline |
| getModeMass() const | IsoSpec::Iso | |
| getMonoisotopicPeakMass() const | IsoSpec::Iso | |
| getTheoreticalAverageMass() const | IsoSpec::Iso | |
| getUnlikeliestPeakLProb() const | IsoSpec::Iso | |
| Iso() (defined in IsoSpec::Iso) | IsoSpec::Iso | |
| Iso(int _dimNumber, const int *_isotopeNumbers, const int *_atomCounts, const double *const *_isotopeMasses, const double *const *_isotopeProbabilities) | IsoSpec::Iso | |
| Iso(const char *formula) | IsoSpec::Iso | |
| Iso(const std::string &formula) | IsoSpec::Iso | inline |
| Iso(Iso &&other) | IsoSpec::Iso | |
| Iso(const Iso &other, bool fullcopy) | IsoSpec::Iso | |
| IsoGenerator(Iso &&iso, bool alloc_partials=true) | IsoSpec::IsoGenerator | |
| IsoLayeredGenerator(Iso &&iso, int _tabSize=1000, int _hashSize=1000, bool reorder_marginals=true, double t_prob_hint=0.99) (defined in IsoSpec::IsoLayeredGenerator) | IsoSpec::IsoLayeredGenerator | |
| isotopeNumbers | IsoSpec::Iso | protected |
| lprob() const override final | IsoSpec::IsoLayeredGenerator | inlinevirtual |
| marginals | IsoSpec::Iso | protected |
| mass() const override final | IsoSpec::IsoLayeredGenerator | inlinevirtual |
| modeLProb | IsoSpec::Iso | protected |
| nextLayer(double offset) override final (defined in IsoSpec::IsoLayeredGenerator) | IsoSpec::IsoLayeredGenerator | virtual |
| partialLProbs | IsoSpec::IsoGenerator | protected |
| partialMasses | IsoSpec::IsoGenerator | protected |
| partialProbs | IsoSpec::IsoGenerator | protected |
| prob() const override final | IsoSpec::IsoLayeredGenerator | inlinevirtual |
| recalc(int idx) | IsoSpec::IsoLayeredGenerator | inline |
| terminate_search() | IsoSpec::IsoLayeredGenerator | |
| ~Iso() | IsoSpec::Iso | virtual |
| ~IsoGenerator() | IsoSpec::IsoGenerator | virtual |
| ~IsoLayeredGenerator() (defined in IsoSpec::IsoLayeredGenerator) | IsoSpec::IsoLayeredGenerator | |