Package org.broad.igv.bbfile

Class RPTreeNodeProxy

java.lang.Object

org.broad.igv.bbfile.RPTreeNodeProxy

All Implemented Interfaces:

RPTreeNode

public class RPTreeNodeProxy
extends java.lang.Object
implements RPTreeNode

Author:

jrobinso

Field Summary

Fields

Modifier and Type	Field	Description
long	fileOffset
SeekableStream	fis
boolean	isLowToHigh

Constructor Summary

Constructors

Constructor	Description
RPTreeNodeProxy(SeekableStream fis, long fileOffset, boolean lowToHigh, int chromId)

Method Summary

Modifier and Type	Method	Description
int	compareRegions(RPChromosomeRegion chromosomeRegion)
boolean	deleteItem(int index)
RPChromosomeRegion	getChromosomeBounds()
org.broad.igv.bbfile.RPTreeNodeItem	getItem(int index)
int	getItemCount()
boolean	insertItem(org.broad.igv.bbfile.RPTreeNodeItem item)
boolean	isLeaf()
void	printItems()

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Field Detail

fis

public SeekableStream fis

fileOffset

public long fileOffset

isLowToHigh

public boolean isLowToHigh

Constructor Detail

RPTreeNodeProxy

public RPTreeNodeProxy(SeekableStream fis,
                       long fileOffset,
                       boolean lowToHigh,
                       int chromId)

Method Detail

isLeaf

public boolean isLeaf()

Specified by:

isLeaf in interface RPTreeNode

getChromosomeBounds

public RPChromosomeRegion getChromosomeBounds()

Specified by:

getChromosomeBounds in interface RPTreeNode

compareRegions

public int compareRegions(RPChromosomeRegion chromosomeRegion)

Specified by:

compareRegions in interface RPTreeNode

getItemCount

public int getItemCount()

Specified by:

getItemCount in interface RPTreeNode

getItem

public org.broad.igv.bbfile.RPTreeNodeItem getItem(int index)

Specified by:

getItem in interface RPTreeNode

insertItem

public boolean insertItem(org.broad.igv.bbfile.RPTreeNodeItem item)

Specified by:

insertItem in interface RPTreeNode

deleteItem

public boolean deleteItem(int index)

Specified by:

deleteItem in interface RPTreeNode

printItems

public void printItems()

Specified by:

printItems in interface RPTreeNode