TestCasesHgvsBase (Snp Effect 4.3t API)

java.lang.Object
- org.snpeff.snpEffect.testCases.integration.TestCasesHgvsBase

Direct Known Subclasses:

TestCasesHgvsExon, TestCasesHgvsIntron
```
public class TestCasesHgvsBase
extends java.lang.Object
```
Test random SNP changes

Author:

pcingola

- Constructor Summary
  
  Constructors
  Constructor Description
  
  TestCasesHgvsBase()
- Method Summary
  
  All Methods Instance Methods Concrete Methods
  Modifier and Type Method Description
  
  void snpEffect(java.lang.String genomeVer, java.lang.String vcfFile)
  Run SnpEff on VCF file
  - Methods inherited from class java.lang.Object
    clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Constructor Detail
- TestCasesHgvsBase
```
public TestCasesHgvsBase()
```

Method Detail

snpEffect

public void snpEffect(java.lang.String genomeVer,
                      java.lang.String vcfFile)

Run SnpEff on VCF file