vg::MultipathAlignmentEmitter Member List

This is the complete list of members for vg::MultipathAlignmentEmitter, including all inherited members.

aln_emitters	vg::MultipathAlignmentEmitter	private
convert_multipath_alignment(const multipath_alignment_t &mp_aln, Alignment &aln, const string *prev_name=nullptr, const string *next_name=nullptr) const	vg::MultipathAlignmentEmitter	private
emit_pairs(const string &name_1, const string &name_2, vector< pair< multipath_alignment_t, multipath_alignment_t >> &&mp_aln_pairs)	vg::MultipathAlignmentEmitter
emit_singles(const string &name, vector< multipath_alignment_t > &&mp_alns)	vg::MultipathAlignmentEmitter
graph	vg::MultipathAlignmentEmitter	private
mp_aln_emitters	vg::MultipathAlignmentEmitter	private
MultipathAlignmentEmitter(ostream &out, int num_threads, const HandleGraph &graph, const string out_format="gamp")	vg::MultipathAlignmentEmitter
multiplexer	vg::MultipathAlignmentEmitter	private
out	vg::MultipathAlignmentEmitter	private
read_group	vg::MultipathAlignmentEmitter	private
sample_name	vg::MultipathAlignmentEmitter	private
set_read_group(const string &read_group)	vg::MultipathAlignmentEmitter
set_sample_name(const string &sample_name)	vg::MultipathAlignmentEmitter
~MultipathAlignmentEmitter()	vg::MultipathAlignmentEmitter