minimizer_mapper.cpp File Reference

#include "minimizer_mapper.hpp"
#include "annotation.hpp"
#include "path_subgraph.hpp"
#include "multipath_alignment.hpp"
#include "split_strand_graph.hpp"
#include "algorithms/dagify.hpp"
#include "algorithms/dijkstra.hpp"
#include <bdsg/overlays/strand_split_overlay.hpp>
#include <gbwtgraph/algorithms.h>
#include <gbwtgraph/cached_gbwtgraph.h>
#include <iostream>
#include <algorithm>
#include <cmath>

Namespaces
	vg

Detailed Description

Defines the code for the minimizer-and-GBWT-based mapper.